STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473205_04272Unannotated protein. (287 aa)    
Predicted Functional Partners:
GCA_000473205_04271
Unannotated protein.
 
     0.925
GCA_000473205_04270
Unannotated protein.
 
     0.907
GCA_000473205_02047
Unannotated protein.
 
     0.769
GCA_000473205_04269
Unannotated protein.
 
     0.638
GCA_000473205_00691
Unannotated protein.
  
     0.595
GCA_000473205_04259
Unannotated protein.
  
     0.551
GCA_000473205_02751
Unannotated protein.
    
 0.540
GCA_000473205_00237
Unannotated protein.
  
     0.494
GCA_000473205_01832
Unannotated protein.
 
    0.460
GCA_000473205_01338
Unannotated protein.
  
     0.430
Your Current Organism:
Pseudophaeobacter arcticus
NCBI taxonomy Id: 999550
Other names: P. arcticus DSM 23566, Phaeobacter arcticus 20188, Phaeobacter arcticus DSM 23566, Phaeobacter sp. 20188, Pseudophaeobacter arcticus DSM 23566
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.