STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHD00549.1Sulfur oxidation protein SoxY; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
AHD00550.1
Sulfur oxidation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AHD00548.1
Monoheme cytochrome C SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.998
AHD00551.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.997
AHD00553.1
Molybdopterin binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.996
AHD00552.1
5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
 
 
 0.995
AHD00554.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.995
sseA
3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.938
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.917
AHD00547.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.914
AHD00545.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.867
Your Current Organism:
Leisingera methylohalidivorans
NCBI taxonomy Id: 999552
Other names: L. methylohalidivorans DSM 14336, Leisingera methylohalidivorans DSM 14336, Leisingera methylohalidivorans MB2, Leisingera methylohalidivorans str. DSM 14336, Leisingera methylohalidivorans strain DSM 14336
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.