STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHD00883.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
AHD00576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.511
AHD01579.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
AHC99784.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.484
AHD00654.1
Murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.482
fliI
ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.470
AHD01029.1
Type I secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
fliE
Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.464
AHD00393.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.422
AHD02548.1
Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.422
AHD02546.1
Flagellar hook protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.411
Your Current Organism:
Leisingera methylohalidivorans
NCBI taxonomy Id: 999552
Other names: L. methylohalidivorans DSM 14336, Leisingera methylohalidivorans DSM 14336, Leisingera methylohalidivorans MB2, Leisingera methylohalidivorans str. DSM 14336, Leisingera methylohalidivorans strain DSM 14336
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.