STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473165_03695Unannotated protein. (602 aa)    
Predicted Functional Partners:
GCA_000473165_03694
Unannotated protein.
 
   
 0.981
GCA_000473165_03696
Unannotated protein.
 
     0.960
GCA_000473165_03679
Unannotated protein.
 
   
 0.871
GCA_000473165_03698
Unannotated protein.
 
     0.843
GCA_000473165_03683
Unannotated protein.
 
     0.802
GCA_000473165_03685
Unannotated protein.
 
     0.802
GCA_000473165_03688
Unannotated protein.
 
     0.801
GCA_000473165_03684
Unannotated protein.
 
     0.800
GCA_000473165_03677
Unannotated protein.
 
     0.796
GCA_000473165_03678
Unannotated protein.
 
     0.796
Your Current Organism:
Leisingera aquimarina
NCBI taxonomy Id: 999611
Other names: L. aquimarina DSM 24565, Leisingera aquimarina DSM 24565, Leisingera aquimarina str. DSM 24565, Leisingera aquimarina strain DSM 24565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.