STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473165_04440Unannotated protein. (268 aa)    
Predicted Functional Partners:
GCA_000473165_04441
Unannotated protein.
 
 0.999
GCA_000473165_01511
Unannotated protein.
 
 0.988
GCA_000473165_04443
Unannotated protein.
 
 
 0.985
GCA_000473165_01510
Unannotated protein.
 
 0.978
GCA_000473165_01513
Unannotated protein.
  
  
 
0.956
GCA_000473165_01512
Unannotated protein.
  
  
 
0.955
GCA_000473165_02944
Unannotated protein.
 
  
  0.954
GCA_000473165_00825
Unannotated protein.
     
 0.950
GCA_000473165_02663
Unannotated protein.
     
 0.948
GCA_000473165_02664
Unannotated protein.
     
 0.948
Your Current Organism:
Leisingera aquimarina
NCBI taxonomy Id: 999611
Other names: L. aquimarina DSM 24565, Leisingera aquimarina DSM 24565, Leisingera aquimarina str. DSM 24565, Leisingera aquimarina strain DSM 24565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.