STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000473165_04719Unannotated protein. (295 aa)    
Predicted Functional Partners:
GCA_000473165_04721
Unannotated protein.
     0.846
GCA_000473165_04718
Unannotated protein.
       0.792
GCA_000473165_04720
Unannotated protein.
 
   
 0.787
GCA_000473165_04984
Unannotated protein.
  
 
 0.731
GCA_000473165_04280
Unannotated protein.
 
  
 0.720
GCA_000473165_04199
Unannotated protein.
  
 
 0.673
GCA_000473165_04980
Unannotated protein.
  
 
 0.664
GCA_000473165_03138
Unannotated protein.
    
 0.657
GCA_000473165_03140
Unannotated protein.
    
 0.657
GCA_000473165_03977
Unannotated protein.
  
 
 0.627
Your Current Organism:
Leisingera aquimarina
NCBI taxonomy Id: 999611
Other names: L. aquimarina DSM 24565, Leisingera aquimarina DSM 24565, Leisingera aquimarina str. DSM 24565, Leisingera aquimarina strain DSM 24565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.