STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT34531.1MFS transporter, DHA1 family, tetracycline resistance protein. (361 aa)    
Predicted Functional Partners:
SFT34548.1
3-carboxy-cis,cis-muconate cycloisomerase.
       0.733
SFT34562.1
3-oxoadipate enol-lactonase.
       0.692
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
      0.653
SFT34603.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.638
SFT34622.1
2-haloacid dehalogenase.
       0.627
SFT34588.1
L-threonine ammonia-lyase.
    
  0.621
SFT34479.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.557
SFT34513.1
Zn-dependent alcohol dehydrogenase.
       0.554
SFT34494.1
Hypothetical protein.
       0.508
SFU12365.1
Phosphopantetheine attachment site.
     
 0.504
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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