STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT38560.1Cytochrome C oxidase, cbb3-type, subunit III. (515 aa)    
Predicted Functional Partners:
SFT38723.1
Protein NirF.
 
 
0.998
SFT38627.1
Transcriptional regulator, AsnC family.
 
  
 0.993
SFT38658.1
Transcriptional regulator, AsnC family.
 
  
 0.993
SFT38690.1
Transcriptional regulator, AsnC family.
 
  
 0.993
SFT38753.1
Cytochrome c55X.
 
  
 0.993
SFT38595.1
Heme d1 biosynthesis radical SAM protein NirJ.
  
 0.990
SFT60396.1
Cytochrome c.
   
 0.981
SFT38932.1
Nitric oxide reductase, NorB subunit apoprotein.
 
 0.971
SFT39018.1
Nitric oxide reductase NorE protein.
 
 0.929
SFT93104.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.907
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.