STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT49645.1Flp pilus assembly protein TadG. (566 aa)    
Predicted Functional Partners:
SFT49597.1
Hypothetical protein.
 
    0.993
SFT49623.1
TadE-like protein.
 
    0.971
SFT66967.1
Haem-NO-binding.
   
    0.969
SFU13923.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
   
    0.969
SFT96321.1
Flagellar protein FlbT.
   
    0.959
SFT79794.1
Pilus assembly protein CpaB.
 
  
 0.935
SFT79726.1
Pilus assembly protein CpaE.
 
  
 0.922
SFT92525.1
Serine/threonine-protein kinase RsbW.
   
    0.850
SFT79643.1
Type II secretion system protein F (GspF).
 
  
 0.814
SFU14416.1
Protein of unknown function.
  
    0.813
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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