STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT44737.1Large terminase phage packaging protein. (392 aa)    
Predicted Functional Partners:
SFT44767.1
Phage portal protein, HK97 family.
    0.966
SFT44831.1
Hypothetical protein.
 
     0.918
SFT44865.1
Phage major capsid protein, HK97 family.
 
     0.907
SFT45020.1
Phage tail tube protein, GTA-gp10.
 
    0.877
SFT45225.1
Putative phage tail protein.
     0.872
SFT44989.1
Phage major tail protein, TP901-1 family.
 
     0.854
SFT45161.1
Phage conserved hypothetical protein BR0599.
 
     0.847
SFT44897.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
    0.840
SFT45093.1
Phage tail tape measure protein, lambda family.
 
    0.840
SFT45131.1
TIGR02217 family protein.
 
     0.837
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.