STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT72006.1Acyl-CoA dehydrogenase. (352 aa)    
Predicted Functional Partners:
SFT71990.1
Acyl-CoA dehydrogenase.
     0.969
SFT72022.1
2-methylcitrate dehydratase PrpD.
 
    0.936
SFT81133.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.844
SFT33905.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.819
SFT71929.1
acyl-CoA dehydrogenase/hypothetical protein.
 
     0.811
SFT71959.1
Acyl dehydratase.
  
  0.786
SFT72054.1
Glutaconate CoA-transferase subunit A.
 
 
  0.771
SFT72070.1
Glutaconate CoA-transferase subunit B.
 
 
  0.757
SFT71633.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.746
SFT84963.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.744
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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