STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT77721.1Ca2+-binding protein, RTX toxin-related. (843 aa)    
Predicted Functional Partners:
SFU17136.1
Hypothetical protein.
  
 0.995
SFT77698.1
Membrane fusion protein, epimerase transport system.
 
  
 0.862
SFT77679.1
Type I secretion system ABC transporter, PrtD family.
 
   
 0.844
SFT92471.1
DNA translocase FtsK.
    
 
 0.833
SFT43734.1
Hemolysin-type calcium-binding repeat-containing protein.
 
     0.775
SFT55199.1
Cysteine-rich secretory protein family protein.
 0.755
SFU21341.1
Hemolysin-type calcium-binding repeat-containing protein.
 
0.754
SFT50254.1
Serralysin.
 
0.753
SFT77079.1
Hemolysin-type calcium-binding repeat-containing protein.
 
0.744
SFU20559.1
Hemolysin-type calcium-binding repeat-containing protein.
 
0.735
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.