STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT80151.1Ribosomal-protein-alanine N-acetyltransferase. (194 aa)    
Predicted Functional Partners:
SFT80091.1
Surfeit locus 1 family protein.
 
     0.830
SFT80132.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
    0.809
SFT80112.1
Threonine synthase.
       0.804
SFT80071.1
Cytochrome c oxidase subunit 3.
       0.672
SFU16822.1
Glutamate synthase (NADPH) large subunit.
   
 
 0.658
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
       0.648
SFT80029.1
Hypothetical protein.
       0.648
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
       0.648
SFU05987.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.635
SFU18578.1
Protein of unknown function.
  
     0.623
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.