STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT85988.1Amino acid ABC transporter substrate-binding protein, PAAT family. (368 aa)    
Predicted Functional Partners:
SFU00781.1
L-glutamine ABC transporter membrane protein.
 
 0.805
SFU16911.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.783
SFU16919.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.782
SFU16924.1
General L-amino acid transport system ATP-binding protein.
 
 0.764
SFU00768.1
L-glutamine ABC transporter ATP-binding protein.
 
 0.762
SFT36060.1
Histidine kinase.
   
 0.735
SFT89065.1
Prephenate dehydrogenase.
    
 0.684
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
   
 
 0.669
SFU03254.1
Prephenate dehydratase.
     
 0.659
SFT56886.1
Aromatic amino acid aminotransferase apoenzyme.
     
 0.642
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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