STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT94370.1Signal transduction histidine kinase. (751 aa)    
Predicted Functional Partners:
SFT36060.1
Histidine kinase.
 
0.999
SFT86351.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
 0.999
SFU14572.1
Response regulator receiver modulated diguanylate cyclase.
 0.998
SFU16127.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 0.997
SFU00658.1
Diguanylate cyclase/phosphodiesterase.
 
 0.992
SFU13923.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
0.992
SFU19137.1
Hypothetical protein.
 
0.992
SFU13916.1
Hpt domain-containing protein.
 
 0.986
SFT54733.1
Signal transduction histidine kinase.
 
 0.977
SFU17497.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
0.976
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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