STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT99961.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (244 aa)    
Predicted Functional Partners:
SFT99972.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
     0.994
SFU11451.1
Mercuric reductase.
     0.908
SFT84787.1
Dihydrolipoamide dehydrogenase.
      0.875
SFU01398.1
Dihydrolipoamide dehydrogenase.
      0.867
SFU20860.1
Dihydrolipoamide dehydrogenase.
      0.851
SFT99982.1
Signal transduction histidine kinase.
       0.817
SFU11457.1
Glutathione reductase (NADPH).
      0.816
SFU17638.1
NADPH-glutathione reductase.
      0.773
rpmH
LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.
       0.626
SFT87077.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.605
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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