STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU02095.1Hypothetical protein. (678 aa)    
Predicted Functional Partners:
SFU16822.1
Glutamate synthase (NADPH) large subunit.
    
 0.931
SFT60362.1
Sulfide dehydrogenase (flavocytochrome c), cytochrome c subunit.
   
 0.901
SFU21071.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
    
 0.898
SFU16960.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit/naphthalene 1,2-dioxygenase system ferredoxin subunit.
  
 0.877
SFU02110.1
Transcriptional regulator, TetR family.
 
  
 0.874
SFT72920.1
2,4-dienoyl-CoA reductase.
 
0.847
SFT98197.1
Thioredoxin reductase (NADPH).
  
 
 0.802
SFT94394.1
Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
  
 0.801
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.795
SFU03346.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.771
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.