STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU08054.1Protein phosphatase/serine/threonine protein phosphatase Stp1. (240 aa)    
Predicted Functional Partners:
SFU08044.1
Type VI secretion system protein ImpM.
 
 0.995
SFT75418.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.993
SFU02163.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
  
 0.991
SFU08034.1
Type VI secretion system protein ImpL.
 
 
 0.978
SFU07969.1
Type VI secretion protein, EvpB/VC_A0108 family/type VI secretion protein, VC_A0107 family.
 
 
 0.973
SFU08024.1
Type VI secretion system protein ImpK.
 
  
 0.967
SFU08014.1
Type VI secretion system protein ImpJ.
 
 
 0.956
SFU04012.1
Dihydrolipoamide dehydrogenase.
  
 0.954
SFU22146.1
Dihydrolipoamide dehydrogenase.
  
 0.954
SFU07223.1
Serine/threonine protein kinase.
 
 0.946
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.