STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU08787.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (192 aa)    
Predicted Functional Partners:
SFU08126.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.798
SFU08799.1
Short chain dehydrogenase.
       0.773
SFU16822.1
Glutamate synthase (NADPH) large subunit.
     
 0.710
SFT44487.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.690
SFU08649.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.680
SFU05977.1
NADPH-dependent glutamate synthase beta chain.
    
 0.666
SFT34710.1
3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  0.663
SFU02172.1
Malonyl CoA-acyl carrier protein transacylase.
  
  0.660
SFT93894.1
Ferredoxin-NADP reductase.
   
 0.653
SFU03346.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 0.653
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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