STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU09569.1Uncharacterized conserved protein. (153 aa)    
Predicted Functional Partners:
SFT92596.1
Uncharacterized conserved protein.
  
     0.745
SFU09582.1
Antibiotic biosynthesis monooxygenase.
       0.683
SFU19375.1
Putative hydrolase of the HAD superfamily.
  
     0.638
SFT92626.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
  
  0.515
SFT90685.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
  
  0.511
SFU19461.1
Glutathione S-transferase.
  
     0.474
SFT90521.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
  
     0.436
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.