STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU17895.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
SFU17901.1
Hypothetical protein.
 
    
0.839
SFU17890.1
Hypothetical protein.
       0.484
SFU18352.1
Predicted dehydrogenase.
  
 
  0.483
SFU17884.1
Glycosyl transferase family 2.
       0.477
SFU17881.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.476
SFU15861.1
2,5-diketo-D-gluconate reductase A.
  
 
  0.466
SFT56135.1
Hypothetical protein.
   
 
  0.449
SFU17875.1
Hypothetical protein.
       0.444
SFT48996.1
Hypothetical protein.
    
  0.430
SFU21323.1
Glycosyltransferase, GT2 family.
 
     0.430
Your Current Organism:
Sedimentitalea nanhaiensis
NCBI taxonomy Id: 999627
Other names: CCTCC AB 208316, DSM 24252, LMG 24841, LMG:24841, Leisingera nanhaiensis, Leisingera nanhaiensis Sun et al. 2010, MCCC 1A04178, S. nanhaiensis, Sedimentitalea nanhaiensis (Sun et al. 2010) Breider et al. 2014, strain NH52F
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.