STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G2XW84_BOTF4Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
G2YY64_BOTF4
Tryptophan synthase.
   
 
 0.858
G2XRD3_BOTF4
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.802
G2YPN8_BOTF4
Histidine biosynthesis trifunctional protein.
   
  
 0.791
G2YYP6_BOTF4
ACPS domain-containing protein.
  
 0.641
G2XNH5_BOTF4
Similar to AMP dependent CoA ligase.
   
 0.525
G2XQG2_BOTF4
Similar to CoA ligase.
   
 0.525
G2XZQ2_BOTF4
Similar to AMP-binding enzyme.
   
 0.525
G2Y0A3_BOTF4
Similar to putative non-ribosomal peptide synthase.
   
 0.525
G2Y2F8_BOTF4
Similar to peroxisomal-coenzyme A synthetase.
   
 0.525
G2Y9R8_BOTF4
Similar to 4-coumarate-CoA ligase.
   
 0.525
Your Current Organism:
Botrytis cinerea T4
NCBI taxonomy Id: 999810
Other names: B. cinerea T4, Botryotinia fuckeliana T4
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