STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_0012Lipid A export ATP-binding/permease protein MsbA. (577 aa)    
Predicted Functional Partners:
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
 0.936
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.831
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.801
TDIS_1635
ABC transporter permease; Belongs to the MlaE permease family.
  
 0.799
htpX
Peptidase M48, Ste24p precursor; Belongs to the peptidase M48B family.
   
 
 0.788
TDIS_0011
Zn-dependent protease with chaperone function.
       0.773
TDIS_0431
Putative ABC transporter, ATP-binding subunit.
 
0.719
TDIS_1484
Pyridine nucleotide-disulfide oxidoreductase.
   
 
 0.717
TDIS_0177
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.706
TDIS_1692
ABC transporter, ATP-binding protein.
  
0.704
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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