Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
TDIS_0028 | TDIS_0779 | Trehalose-6-phosphate phosphatase. | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | 0.767 |
TDIS_0028 | TDIS_0783 | Trehalose-6-phosphate phosphatase. | Glycosyl transferase. | 0.680 |
TDIS_0028 | TDIS_2050 | Trehalose-6-phosphate phosphatase. | Hypothetical protein. | 0.943 |
TDIS_0778 | TDIS_0779 | Sulfotransferase. | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | 0.787 |
TDIS_0778 | TDIS_0780 | Sulfotransferase. | Methyltransferase, FkbM family domain protein. | 0.773 |
TDIS_0778 | TDIS_0781 | Sulfotransferase. | Asparagine synthetase [glutamine-hydrolyzing]. | 0.775 |
TDIS_0778 | TDIS_0782 | Sulfotransferase. | Hypothetical protein. | 0.773 |
TDIS_0778 | TDIS_0783 | Sulfotransferase. | Glycosyl transferase. | 0.773 |
TDIS_0778 | TDIS_0784 | Sulfotransferase. | Oligosaccharyltransferase PglB. | 0.773 |
TDIS_0778 | TDIS_0786 | Sulfotransferase. | Putative electron transfer flavoprotein-quinone oxidoreductase FixC. | 0.621 |
TDIS_0778 | TDIS_2050 | Sulfotransferase. | Hypothetical protein. | 0.536 |
TDIS_0779 | TDIS_0028 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Trehalose-6-phosphate phosphatase. | 0.767 |
TDIS_0779 | TDIS_0778 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Sulfotransferase. | 0.787 |
TDIS_0779 | TDIS_0780 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Methyltransferase, FkbM family domain protein. | 0.801 |
TDIS_0779 | TDIS_0781 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Asparagine synthetase [glutamine-hydrolyzing]. | 0.817 |
TDIS_0779 | TDIS_0782 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Hypothetical protein. | 0.773 |
TDIS_0779 | TDIS_0783 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Glycosyl transferase. | 0.797 |
TDIS_0779 | TDIS_0784 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Oligosaccharyltransferase PglB. | 0.773 |
TDIS_0779 | TDIS_0786 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Putative electron transfer flavoprotein-quinone oxidoreductase FixC. | 0.666 |
TDIS_0779 | TDIS_1309 | Alpha-1,4-N-acetylgalactosamine transferase PglJ. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.699 |
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