STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_0886Heme biosynthesis protein; Related to NirD and NirG. (325 aa)    
Predicted Functional Partners:
TDIS_1285
Radical SAM domain heme biosynthesis protein.
 
 
  0.948
TDIS_0819
Radical SAM domain heme biosynthesis protein.
 
 
  0.836
TDIS_1736
Para-aminobenzoate synthase component I fused to aminotransferase class IV domain.
     
 0.637
TDIS_1076
Uroporphyrinogen-III methyltransferase.
 
 
 0.589
TDIS_0885
Ferredoxin.
       0.565
TDIS_1464
2-oxoglutarate oxidoreductase, alpha subunit.
    
  0.538
TDIS_1125
Biotin operon repressor / Biotin-protein ligase.
   
 
 0.482
TDIS_0108
Radical SAM domain protein.
  
 
  0.479
TDIS_0882
Hypothetical protein.
       0.442
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.442
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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