STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_1218CRISPR-associated RAMP protein, Csm4 family. (324 aa)    
Predicted Functional Partners:
TDIS_1217
CRISPR-associated protein, Csm5 family.
 
 
 0.998
TDIS_1839
CRISPR-associated protein, Csm2 family.
 
 
 0.993
TDIS_1840
CRISPR-associated protein, Csm1 family.
 
 
 0.987
TDIS_1219
Putative nucleic acid-binding protein, containing PIN domain.
       0.773
TDIS_1215
Putative CRISPR-associated protein.
 
     0.722
TDIS_1795
CRISPR-associated helicase Cas3.
 
     0.612
TDIS_1049
Hypothetical protein.
  
     0.598
TDIS_1216
Hypothetical protein.
       0.592
TDIS_1797
CRISPR-associated negative autoregulator.
  
   
 0.581
TDIS_0411
Hypothetical protein.
  
     0.547
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.