STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_1411High-affinity leucine-specific transport system, periplasmic binding protein LivK. (389 aa)    
Predicted Functional Partners:
TDIS_1409
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.972
TDIS_1408
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
TDIS_1410
Branched-chain amino acid transport ATP-binding protein LivG.
 
 
 0.952
TDIS_0447
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.923
TDIS_0446
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.920
TDIS_0616
Branched-chain amino acid transport ATP-binding protein LivG.
 
 
 0.882
TDIS_0617
Branched-chain amino acid transport ATP-binding protein LivF.
 
 
 0.852
TDIS_1412
Phosphatidylglycerophosphatase A.
       0.773
TDIS_0771
Two-component hybrid sensor and regulator.
  
 0.496
TDIS_1407
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
    0.458
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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