STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDIS_1559Formylmethanofuran dehydrogenase subunit E. (206 aa)    
Predicted Functional Partners:
TDIS_0999
Carbon monoxide dehydrogenase CooS subunit.
  
  
  0.716
TDIS_0595
Carbon monoxide dehydrogenase CooS subunit.
  
  
  0.698
TDIS_1007
CO dehydrogenase/acetyl-CoA synthase, acetyl-CoA synthase subunit.
  
  
  0.551
TDIS_0311
Cytochrome c family protein.
  
     0.537
TDIS_1995
Hypothetical protein.
  
     0.516
TDIS_1557
Agmatinase; Belongs to the arginase family.
       0.503
TDIS_1558
Hypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
       0.503
TDIS_1008
Acetyl-CoA synthase corrinoid iron-sulfur protein, large subunit.
  
  
  0.496
TDIS_1555
Signal transduction histidine kinase.
       0.477
TDIS_1556
Type IV fimbriae expression regulatory protein PilR.
       0.477
Your Current Organism:
Thermosulfurimonas dismutans
NCBI taxonomy Id: 999894
Other names: DSM 24515, T. dismutans, Thermodesulfobacteriaceae bacterium S95, Thermosulfurimonas dismutans Slobodkin et al. 2012, VKM B-2683, strain S95
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