Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU63539.1 | KLU63540.1 | CEB3_c00880 | CEB3_c00890 | Hypothetical protein. | Hypothetical protein. | 0.785 |
KLU63539.1 | KLU63541.1 | CEB3_c00880 | CEB3_c00900 | Hypothetical protein. | Universal stress protein family protein. | 0.412 |
KLU63540.1 | KLU63539.1 | CEB3_c00890 | CEB3_c00880 | Hypothetical protein. | Hypothetical protein. | 0.785 |
KLU63540.1 | KLU63541.1 | CEB3_c00890 | CEB3_c00900 | Hypothetical protein. | Universal stress protein family protein. | 0.440 |
KLU63541.1 | KLU63539.1 | CEB3_c00900 | CEB3_c00880 | Universal stress protein family protein. | Hypothetical protein. | 0.412 |
KLU63541.1 | KLU63540.1 | CEB3_c00900 | CEB3_c00890 | Universal stress protein family protein. | Hypothetical protein. | 0.440 |
KLU63541.1 | adaB | CEB3_c00900 | CEB3_c04260 | Universal stress protein family protein. | methylated-DNA--protein-cysteine methyltransferase, inducible. | 0.438 |
KLU63541.1 | clcA | CEB3_c00900 | CEB3_c16060 | Universal stress protein family protein. | H(+)/Cl(-) exchange transporter ClcA. | 0.485 |
KLU63541.1 | yvyD | CEB3_c00900 | CEB3_c42250 | Universal stress protein family protein. | Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.461 |
adaB | KLU63541.1 | CEB3_c04260 | CEB3_c00900 | methylated-DNA--protein-cysteine methyltransferase, inducible. | Universal stress protein family protein. | 0.438 |
clcA | KLU63541.1 | CEB3_c16060 | CEB3_c00900 | H(+)/Cl(-) exchange transporter ClcA. | Universal stress protein family protein. | 0.485 |
yvyD | KLU63541.1 | CEB3_c42250 | CEB3_c00900 | Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Universal stress protein family protein. | 0.461 |