Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cooF_1 | cooF_2 | CEB3_c00730 | CEB3_c36360 | Iron-sulfur protein. | Iron-sulfur protein. | 0.784 |
cooF_1 | fdhA | CEB3_c00730 | CEB3_c02120 | Iron-sulfur protein. | Formate dehydrogenase subunit alpha precursor. | 0.926 |
cooF_1 | fdhF | CEB3_c00730 | CEB3_c35580 | Iron-sulfur protein. | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.850 |
cooF_1 | fdnG | CEB3_c00730 | CEB3_c02110 | Iron-sulfur protein. | Formate dehydrogenase, nitrate-inducible, major subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.926 |
cooF_1 | fdnH | CEB3_c00730 | CEB3_c02100 | Iron-sulfur protein. | Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit. | 0.818 |
cooF_1 | fdoI | CEB3_c00730 | CEB3_c02090 | Iron-sulfur protein. | Formate dehydrogenase, cytochrome b556(fdo) subunit. | 0.947 |
cooF_2 | cooF_1 | CEB3_c36360 | CEB3_c00730 | Iron-sulfur protein. | Iron-sulfur protein. | 0.784 |
cooF_2 | fdhA | CEB3_c36360 | CEB3_c02120 | Iron-sulfur protein. | Formate dehydrogenase subunit alpha precursor. | 0.895 |
cooF_2 | fdhF | CEB3_c36360 | CEB3_c35580 | Iron-sulfur protein. | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.850 |
cooF_2 | fdnG | CEB3_c36360 | CEB3_c02110 | Iron-sulfur protein. | Formate dehydrogenase, nitrate-inducible, major subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.901 |
cooF_2 | fdnH | CEB3_c36360 | CEB3_c02100 | Iron-sulfur protein. | Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit. | 0.701 |
cooF_2 | fdoI | CEB3_c36360 | CEB3_c02090 | Iron-sulfur protein. | Formate dehydrogenase, cytochrome b556(fdo) subunit. | 0.903 |
cooF_2 | ydhX | CEB3_c36360 | CEB3_c09320 | Iron-sulfur protein. | Putative ferredoxin-like protein YdhX precursor. | 0.747 |
dmsB_1 | fdhA | CEB3_c42860 | CEB3_c02120 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase subunit alpha precursor. | 0.845 |
dmsB_1 | fdhF | CEB3_c42860 | CEB3_c35580 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.630 |
dmsB_1 | fdnG | CEB3_c42860 | CEB3_c02110 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase, nitrate-inducible, major subunit precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.819 |
dmsB_1 | fdnH | CEB3_c42860 | CEB3_c02100 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit. | 0.621 |
dmsB_1 | fdoI | CEB3_c42860 | CEB3_c02090 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase, cytochrome b556(fdo) subunit. | 0.885 |
dmsB_1 | ydhX | CEB3_c42860 | CEB3_c09320 | Anaerobic dimethyl sulfoxide reductase chain B. | Putative ferredoxin-like protein YdhX precursor. | 0.726 |
dmsB_2 | fdhA | CEB3_c42890 | CEB3_c02120 | Anaerobic dimethyl sulfoxide reductase chain B. | Formate dehydrogenase subunit alpha precursor. | 0.882 |
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