STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU63235.1NADH-plastoquinone oxidoreductase subunit. (347 aa)    
Predicted Functional Partners:
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
 0.870
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
    
 0.870
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
    
 0.865
hndD
NADP-reducing hydrogenase subunit HndC.
   
 0.850
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.819
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
 0.798
KLU59863.1
ABC-2 family transporter protein.
 
   
 0.777
KLU60117.1
NYN domain protein.
  
     0.774
KLU59254.1
Hypothetical protein.
  
     0.767
hndC_1
NADP-reducing hydrogenase subunit HndC.
    
 0.756
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.