STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lutR_1HTH-type transcriptional regulator LutR. (237 aa)    
Predicted Functional Partners:
yvoA_7
HTH-type transcriptional repressor YvoA.
  
    0.719
KLU63235.1
NADH-plastoquinone oxidoreductase subunit.
 
     0.681
yvoA_5
HTH-type transcriptional repressor YvoA.
  
    0.618
yvoA_4
HTH-type transcriptional repressor YvoA.
  
    0.608
yvoA_2
HTH-type transcriptional repressor YvoA.
  
    0.582
fadR_2
Fatty acid metabolism regulator protein.
  
     0.548
KLU63237.1
Hypothetical protein.
       0.533
glcA
Glycolate permease GlcA; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.470
yurK_1
Putative HTH-type transcriptional regulator YurK.
  
    0.434
dctP
C4-dicarboxylate-binding periplasmic protein precursor.
 
     0.420
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.