STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucI_2L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (600 aa)    
Predicted Functional Partners:
rhaB_1
Rhamnulokinase.
 
 
 0.922
rhaB_2
Rhamnulokinase.
 
 
 0.863
rbsB_1
D-ribose-binding periplasmic protein precursor.
 
     0.633
glcK
Glucokinase.
    
 0.557
mtnB_2
Methylthioribulose-1-phosphate dehydratase.
 
 
 0.488
fucA_2
L-fuculose phosphate aldolase.
 
 
 0.488
mtnB_1
Methylthioribulose-1-phosphate dehydratase.
 
 
 0.487
kdgK_1
2-dehydro-3-deoxygluconokinase.
    
  0.445
ydjH_1
Putative sugar kinase YdjH.
    
  0.445
iolC_1
5-dehydro-2-deoxygluconokinase.
    
  0.445
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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