STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU62991.1Hypothetical protein. (622 aa)    
Predicted Functional Partners:
KLU61694.1
PspC domain protein.
  
 
 0.841
KLU59895.1
DNA-binding transcriptional activator PspC.
  
 
 0.841
norR2
Nitric oxide reductase transcription regulator NorR2.
   
 
 0.625
ntrC_1
Nitrogen assimilation regulatory protein.
   
 
 0.622
vgb_1
Virginiamycin B lyase.
       0.590
yqiK
Inner membrane protein YqiK.
  
  
 0.533
KLU61422.1
Hypothetical protein.
  
  
 0.510
degS_1
Signal transduction histidine-protein kinase/phosphatase DegS.
  
  
 0.448
ykvP
Spore protein YkvP.
       0.435
cph2
Phytochrome-like protein cph2.
   
 
 0.429
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.