STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU62837.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
nikQ_1
Nickel transport protein NikQ.
  
 
  0.942
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
    
  0.927
ecfA3
Energy-coupling factor transporter ATP-binding protein EcfA3; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
  
 
  0.873
nikQ_2
Nickel transport protein NikQ.
  
 
  0.733
nikMN
Fused nickel transport protein NikMN.
    
  0.693
pduX
L-threonine kinase.
  
    0.666
nikO
Nickel import ATP-binding protein NikO.
   
 
  0.656
cbiO
Cobalt import ATP-binding protein CbiO.
   
 
  0.622
cobT_1
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.
  
    0.595
cobT_2
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
  
    0.595
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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