STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA3Energy-coupling factor transporter ATP-binding protein EcfA3; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (282 aa)    
Predicted Functional Partners:
cbiM
Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.994
nikQ_1
Nickel transport protein NikQ.
 
 0.990
ecfT_2
Energy-coupling factor transporter transmembrane protein EcfT.
 
 0.977
nikQ_2
Nickel transport protein NikQ.
 
 0.969
nikMN
Fused nickel transport protein NikMN.
 
 0.964
ddpD
Putative D,D-dipeptide transport ATP-binding protein DdpD; Belongs to the ABC transporter superfamily.
 
    
0.916
ecfT_1
Energy-coupling factor transporter transmembrane protein EcfT.
  
 0.891
bioY
Biotin transporter BioY.
  
 0.890
KLU62837.1
Hypothetical protein.
  
 
  0.873
nikO
Nickel import ATP-binding protein NikO.
  
  
 
0.801
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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