Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU60934.1 | vanW_1 | CEB3_c29070 | CEB3_c08250 | Cysteine-rich secretory protein family protein. | Vancomycin B-type resistance protein VanW. | 0.455 |
mltG | vanW_1 | CEB3_c08260 | CEB3_c08250 | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Vancomycin B-type resistance protein VanW. | 0.627 |
mltG | ydcP_1 | CEB3_c08260 | CEB3_c08270 | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | Putative protease YdcP precursor. | 0.705 |
vanW_1 | KLU60934.1 | CEB3_c08250 | CEB3_c29070 | Vancomycin B-type resistance protein VanW. | Cysteine-rich secretory protein family protein. | 0.455 |
vanW_1 | mltG | CEB3_c08250 | CEB3_c08260 | Vancomycin B-type resistance protein VanW. | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.627 |
vanW_1 | ydcP_1 | CEB3_c08250 | CEB3_c08270 | Vancomycin B-type resistance protein VanW. | Putative protease YdcP precursor. | 0.415 |
vanW_1 | yocH_1 | CEB3_c08250 | CEB3_c15920 | Vancomycin B-type resistance protein VanW. | Cell wall-binding protein YocH precursor. | 0.485 |
ydcP_1 | mltG | CEB3_c08270 | CEB3_c08260 | Putative protease YdcP precursor. | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.705 |
ydcP_1 | vanW_1 | CEB3_c08270 | CEB3_c08250 | Putative protease YdcP precursor. | Vancomycin B-type resistance protein VanW. | 0.415 |
yocH_1 | vanW_1 | CEB3_c15920 | CEB3_c08250 | Cell wall-binding protein YocH precursor. | Vancomycin B-type resistance protein VanW. | 0.485 |