STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpC_2Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. (381 aa)    
Predicted Functional Partners:
sugB_1
Trehalose transport system permease protein SugB.
 0.987
ycjO
Inner membrane ABC transporter permease protein YcjO.
 
 0.984
araQ_1
L-arabinose transport system permease protein AraQ.
 0.980
ycjP_3
Inner membrane ABC transporter permease protein YcjP.
 
 0.967
malE
Maltose-binding periplasmic protein precursor.
 
 0.953
sugA_2
Trehalose transport system permease protein SugA.
 
 0.952
malF
Maltose transport system permease protein MalF.
 
 0.950
sugB_2
Trehalose transport system permease protein SugB.
 0.948
sugB_4
Trehalose transport system permease protein SugB.
 0.948
ycjP_1
Inner membrane ABC transporter permease protein YcjP.
 0.947
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.