STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metH_11Methionine synthase. (214 aa)    
Predicted Functional Partners:
acsE_1
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
  0.960
acsE_4
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
  0.958
acsE_5
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
  0.956
acsE_6
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
  0.943
acsE_2
5-methyltetrahydrofolate:corrinoid/iron-sulfur protein co-methyltransferase.
 
  0.941
KLU62704.1
Tetrahydromethanopterin S-methyltransferase subunit H.
 
  
 0.862
KLU62188.1
Methanol-cobalamin methyltransferase B subunit.
   
 0.857
KLU62703.1
Trimethylamine methyltransferase (MTTB); Belongs to the trimethylamine methyltransferase family.
    
  0.852
metH_25
Methionine synthase.
  
  
 
0.728
metH_26
Methionine synthase.
  
  
 
0.712
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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