STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narTPutative nitrate transporter NarT. (404 aa)    
Predicted Functional Partners:
pcrA_3
Perchlorate reductase subunit alpha precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.985
KLU61517.1
Nitrate reductase gamma subunit.
  
 
 0.843
nasD_1
Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
 0.838
KLU61300.1
Hypothetical protein.
  
 
 0.822
nasF
uroporphyrinogen-III C-methyltransferase.
  
  
 0.817
padH
NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon.
 
 
 0.797
fdhF
Formate dehydrogenase H; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.777
nasD_2
Nitrite reductase [NAD(P)H].
  
 
 0.769
sfrA
NADPH-Fe(3+) oxidoreductase subunit alpha.
  
 
 0.739
KLU61057.1
Nitronate monooxygenase.
  
 
 0.736
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.