STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU62409.1FR47-like protein. (179 aa)    
Predicted Functional Partners:
KLU62408.1
Putative S-adenosyl-L-methionine-dependent methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
    0.774
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
    
  0.660
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
    
  0.660
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
    
  0.657
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
    
  0.655
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.641
yqiK
Inner membrane protein YqiK.
  
  
 0.628
KLU62407.1
Acetyltransferase (GNAT) family protein.
  
  
 0.574
KLU59850.1
Aminoalkylphosphonic acid N-acetyltransferase.
 
 
 0.552
hisE
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
    
  0.538
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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