STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU62247.1transposase/IS protein. (93 aa)    
Predicted Functional Partners:
KLU62631.1
transposase/IS protein.
 
     0.966
KLU63574.1
Integrase core domain protein.
 
  
 0.797
KLU63310.1
Integrase core domain protein.
 
  
 0.797
KLU62781.1
Hypothetical protein.
 
  
 0.797
KLU62630.1
Integrase core domain protein.
 
  
 0.797
KLU63309.1
Hypothetical protein.
 
  
 0.796
KLU62780.1
Hypothetical protein.
 
  
 0.796
KLU63573.1
Hypothetical protein.
 
  
 0.787
dnaA_1
Chromosomal replication initiator protein DnaA.
  
     0.769
dnaC_2
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.638
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.