STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU62216.1PrkA AAA domain protein. (633 aa)    
Predicted Functional Partners:
KLU62217.1
Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family.
  
 0.996
KLU62218.1
SpoVR family protein.
 
  
 0.994
otsA
Trehalose-phosphate synthase.
   
  
 0.951
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.700
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.692
ybeZ_1
PhoH-like protein.
   
  
 0.661
KLU61200.1
Rubrerythrin.
   
    0.630
KLU61967.1
Hypothetical protein.
   
  
 0.438
spoIIID
Stage III sporulation protein D.
   
    0.434
sgcG_1
2-amino-4-deoxychorismate dehydrogenase.
   
    0.416
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.