Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
korB_1 | nifJ_1 | CEB3_c05520 | CEB3_c04240 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate-flavodoxin oxidoreductase. | 0.992 |
korB_1 | nifJ_2 | CEB3_c05520 | CEB3_c27260 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate-flavodoxin oxidoreductase. | 0.995 |
korB_1 | nifJ_3 | CEB3_c05520 | CEB3_c44130 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate-flavodoxin oxidoreductase. | 0.996 |
korB_1 | nifJ_4 | CEB3_c05520 | CEB3_c47060 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate-flavodoxin oxidoreductase. | 0.995 |
korB_1 | padG_1 | CEB3_c05520 | CEB3_c16980 | 2-oxoglutarate oxidoreductase subunit KorB. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.828 |
korB_1 | padG_3 | CEB3_c05520 | CEB3_c25040 | 2-oxoglutarate oxidoreductase subunit KorB. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.939 |
korB_1 | padI | CEB3_c05520 | CEB3_c25030 | 2-oxoglutarate oxidoreductase subunit KorB. | NADH-dependent phenylglyoxylate dehydrogenase subunit beta. | 0.692 |
korB_1 | porB | CEB3_c05520 | CEB3_c16990 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate synthase subunit PorB. | 0.691 |
korB_1 | porC_1 | CEB3_c05520 | CEB3_c16960 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate synthase subunit PorC. | 0.978 |
korB_1 | porD | CEB3_c05520 | CEB3_c16970 | 2-oxoglutarate oxidoreductase subunit KorB. | Pyruvate synthase subunit PorD. | 0.979 |
nifJ_1 | korB_1 | CEB3_c04240 | CEB3_c05520 | Pyruvate-flavodoxin oxidoreductase. | 2-oxoglutarate oxidoreductase subunit KorB. | 0.992 |
nifJ_1 | nifJ_2 | CEB3_c04240 | CEB3_c27260 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
nifJ_1 | nifJ_3 | CEB3_c04240 | CEB3_c44130 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
nifJ_1 | nifJ_4 | CEB3_c04240 | CEB3_c47060 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
nifJ_1 | padG_1 | CEB3_c04240 | CEB3_c16980 | Pyruvate-flavodoxin oxidoreductase. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.987 |
nifJ_1 | padG_3 | CEB3_c04240 | CEB3_c25040 | Pyruvate-flavodoxin oxidoreductase. | NADH-dependent phenylglyoxylate dehydrogenase subunit alpha. | 0.988 |
nifJ_1 | padI | CEB3_c04240 | CEB3_c25030 | Pyruvate-flavodoxin oxidoreductase. | NADH-dependent phenylglyoxylate dehydrogenase subunit beta. | 0.992 |
nifJ_1 | porB | CEB3_c04240 | CEB3_c16990 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate synthase subunit PorB. | 0.992 |
nifJ_1 | porC_1 | CEB3_c04240 | CEB3_c16960 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate synthase subunit PorC. | 0.999 |
nifJ_1 | porD | CEB3_c04240 | CEB3_c16970 | Pyruvate-flavodoxin oxidoreductase. | Pyruvate synthase subunit PorD. | 0.999 |
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