STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU61912.1Citrate transporter. (465 aa)    
Predicted Functional Partners:
ydiF_1
Acetate CoA-transferase YdiF; Belongs to the 3-oxoacid CoA-transferase family.
 
     0.787
acdA_2
acyl-CoA dehydrogenase.
  
    0.624
atoE
Short-chain fatty acids transporter.
 
   
 0.611
garK
Glycerate 2-kinase; Belongs to the glycerate kinase type-1 family.
  
  
 0.508
gntZ
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating.
  
  
 0.466
phaJ
(R)-specific enoyl-CoA hydratase.
 
     0.464
etfB_1
Electron transfer flavoprotein subunit beta.
       0.411
hisE
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
      
 0.407
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.