STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU61731.1Hypothetical protein. (103 aa)    
Predicted Functional Partners:
KLU61732.1
Hypothetical protein.
       0.714
KLU61733.1
Hypothetical protein.
       0.714
parE_2
DNA topoisomerase 4 subunit B.
       0.689
KLU61735.1
Hypothetical protein.
       0.689
KLU61730.1
Hypothetical protein.
       0.443
KLU61727.1
Putative conjugal transfer proteinc.
       0.406
KLU61728.1
Isoprenylcysteine carboxyl methyltransferase (ICMT) family protein.
       0.406
KLU61729.1
Hypothetical protein.
       0.406
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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