STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU61741.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
KLU61742.1
Hypothetical protein.
       0.737
ftsH2
ATP-dependent zinc metalloprotease FtsH 2.
       0.737
gyrA_3
DNA gyrase subunit A.
       0.737
dpnM_2
Modification methylase DpnIIA.
       0.737
KLU61740.1
Hypothetical protein.
       0.584
dpnM_3
Modification methylase DpnIIA.
       0.556
KLU61739.1
Hypothetical protein.
       0.542
nreC_3
Oxygen regulatory protein NreC.
       0.535
ftsH_4
ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family.
       0.521
KLU61738.1
Hypothetical protein.
       0.521
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.