STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU61766.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
cshA_1
DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.
   
 0.492
cshA_2
DEAD-box ATP-dependent RNA helicase CshA; Belongs to the DEAD box helicase family.
   
 0.492
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
  
 0.476
cca_1
Multifunctional CCA protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.472
KLU61767.1
Hypothetical protein.
       0.470
KLU61765.1
Hypothetical protein.
       0.462
ykuD_2
Putative L,D-transpeptidase YkuD.
       0.444
KLU61769.1
Hypothetical protein.
       0.444
moaA_1
Cyclic pyranopterin monophosphate synthase.
       0.441
KLU61770.1
Hypothetical protein.
       0.428
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.