STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU61801.1Archaeal ATPase. (312 aa)    
Predicted Functional Partners:
tolB
Protein TolB.
  
     0.749
KLU63588.1
Hypothetical protein.
  
     0.625
KLU60291.1
Hypothetical protein.
  
     0.617
KLU59660.1
Methylcobalamin:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.601
KLU62066.1
Glycosyl transferase family 2.
  
     0.568
KLU61802.1
Putative transposase.
       0.565
KLU63391.1
Hypothetical protein.
  
     0.551
KLU62627.1
Hypothetical protein.
  
     0.551
KLU62660.1
Hypothetical protein.
  
     0.521
vapC_2
tRNA(fMet)-specific endonuclease VapC.
  
     0.494
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.