STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acsA_1Acetyl-coenzyme A synthetase. (552 aa)    
Predicted Functional Partners:
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.905
nifJ_3
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.893
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 0.889
nifJ_4
Pyruvate-flavodoxin oxidoreductase.
  
 0.889
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.884
mmgC_2
acyl-CoA dehydrogenase.
 
 
 0.771
acdA_1
acyl-CoA dehydrogenase.
 
 
 0.771
mmgC_3
acyl-CoA dehydrogenase.
 
 
 0.771
acdA_2
acyl-CoA dehydrogenase.
 
 
 0.771
acd
glutaryl-CoA dehydrogenase.
 
 
 0.771
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.